leishDB

Integrating Leishmania genomic information.


What is leishDB?

LeishDB is a database for leishmania genomic information. Currently, it stores data related to coding genes and non-coding RNAs from L. braziliensis.

NCBI genome

JBrowser

Coding genes prediction

Characterization of predicted coding genes

Non coding RNA prediction

Relational Model Storage

Download and acess all data

Statistics

  • 1 annotated organism (L. braziliensis)
  • 11491 predicted ORFs
  • 5263 genes with defined function
  • 10595 predicted and classified non-coding RNAs

Annotations in running

  • L. braziliensis
    100% - Completed.
  • L. major
    10% - Downloading the files...
  • L. peruviania
    0% - Waiting on the queue...
  • L. panamensis
    0% - Waiting on the queue...
  • L. amazonensis
    0% - Waiting on the queue...

Downloads

Organism GFF FASTA BED
L. braziliensis (MHOM/BR/75/M2904) Download GFF Download FASTA Download BED

Citing

Felipe Torres, Raúl Arias-Carrasco, José C. Caris-Maldonado, Aldina Barral, Vinicius Maracaja-Coutinho, Artur T. L. De Queiroz; LeishDB: a database of coding gene annotation and non-coding RNAs in Leishmania braziliensis. Database (Oxford) 2017; 2017 (1): bax047. doi: 10.1093/database/bax047; [ Link for access]